Got out of boot loops with the following (ymmv)
start the phone in download mode,
from QPST Diag remove/add com port
then reset phone from memory debug app
imho we will likely need to build a kernel that includes cwm.
It's possible but we would have to be able to get the kernel on the phone first, I was looking into booting to a cwm from a SD card @
http://androidforums.com/nookcolor-all-things-root/327798-guide-how-make-bootable-cwm-3-2-0-1-clockworkmod-twrp-2-1-1-bootable-sd-card-4-22-2012-a.html
If anyone wants to try, If it works then maybe we could flash a recovery from there and it will work, who knows, and if not like you said we could flash a kernel with a recovery already in it. and pray the androidian gods