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Root Losing apps when restoring.

I'm currently using TWRP 2.1.3. I've been using this for awhile with no problems until recently. Lately when restoring a backed up ROM, there are 4 or 5 apps missing. Does anyone know what might be causing this?
 
I'm currently using TWRP 2.1.3. I've been using this for awhile with no problems until recently. Lately when restoring a backed up ROM, there are 4 or 5 apps missing. Does anyone know what might be causing this?

Are they apps you downloaded, or ones that came with a ROM?
 
Did you install them after you made a back-up? Make sure when you create a back-up with the most recent apps you downloaded.
 
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